Hi,
I just realized that you posted a reply. Dev Exchange postings expire after two weeks, so I didn't get the notification for the reply.
You can always contact the technical support department directly at www.ni.com/ask.
I don't know the exact technical reasons that the CAN interfaces do not work after standby. It has to do, among other things, with the fact the the interface's firmware is stored in volatile memory. As described in this knowledge base article:
Why Does my NI-CAN Card Hang or Report Incorrect Data After My Computer Woke Up from a Power Save Mo...This is something that R&D is working on.
DiegoF
N
ational Instruments