RTSI can be your friend here. I often find it convenient to put signals on the RTSI bus, even when I'm only using a single DAQ board like the PCI-6602.
When you are configuring your pulse generator, add the vi called "Route Signal.vi" to the chain. (found in Data Acq. Palette --> Cal & Config sub-palette. Use online help to get details). Send the pulse generating counter's output to one of the RTSI lines. Then set the Gate Specification for your other counters to be the same RTSI line.
-Kevin P.
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