Hello,
Are you using Traditional NI-DAQ, or NI-DAQmx?
You can only use one counter at a time for a specific measurement. Depending on the type of measurement you are making (period, pulse width, counting), your task could use 2 counters.
Do you want Counter0 to output a finite or continuous pulse train? A finite pulse train requires the use of both counters. You would not be able to use Counter1 with this configuration.
If you are using Counter1 to measure frequency, make sure that you are not using the 2 counter method.
If you want Counter0 to generate a PWM signal, why are you connecting anything to the source pin? If you want Counter1 to measure frequency, you should connect the signal that you want to measure to either the gate or source of that counter. Why did you connect the output of Counter1 to the gate of counter 0?
Regards,
Sean C.