SonarRob,
The PCLK, REQ, ACK and STOPTRIG lines can be used as additional I/O lines/port in unstrobed mode only. Pages 2-3 thru 2-6 of the 635x User Manual give a great explanation of the theory, which lines are output or input, and a programming flow diagram based on your programming language. Please post again if you have additional questions after reading these pages. Have a great day!