Paul,
The SH6868, 2m cable is capable of transmitting signals up to 20 MHz. Any noise induced into the system will occur at the point where you make the connection to your terminal block or in the method used for frequency measurement. If you are trying to use Method 1 (previous link to frequency measurement tutorial), your error is greatly increased for a 5 MHz signal then for a 5kHz signal. Method 2 is much better for your application, but it requires 2 counters to measure the frequency of a single signal.
The error incurred by choosing the wrong measurement method is called synchronization error. Synchronization error is due to the gate and source edge not being synchronized, causing the final measurement to be off by as much as +/- 1 e
dge. Consider two separate signals with frequencies 50 kHz and 5 MHz. Using a 20 MHz timebase, source cycles last 50 ns. The number of 50 ns periods that occur during one cycle of a 50 kHz signal is 400 +/- 1, which yields a frequency measurement between 49.88 and 50.13 kHz. On the other hand, the number of 50 ns periods that occur during one cycle of a 5 MHz signal is 4 +/- 1, which yields a frequency measurement between 4 and 6.67 MHz. Method 2 is much better suited for high frequency measurements.
Hope this helps.
Kristi