Hi tritone.
I have had that problem saving data from pxi high speed digitizer. It looks like the hard drive takes some time to write the data buffer. ( in my case, gui freezes about 100 ms every second). The solution was a consumer/producer design, as you can see in this NI link.
http://zone.ni.com/devzone/conceptd.nsf/webmain/C54BADADD8BBDE4286256C5200533B80?opendocument
Hope it solves your problem
Alipio
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"Qod natura non dat, Salmantica non praestat"
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