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data compression

Dear all,
 
I am acquiring data an then preforming a sample compression in Labview by a factor of 20 (using the last as the reduction method). The problem is the final signals seems to be different than the initial one, I mean the final one is contaminated with a lot of noise.  Does anybody Knows another technique or another tool to do this compression?
 
Rafo
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What does the data itself look like? How noisy is it? How fast does it change? What is the signal's dynamic range?

Mike...

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