WALT, I think I can help you with that. Tomorrow I'll send you my VI. The critical issue is you need to synch your input to output or your phase plot is USELESS. I developed a pretty nifty VI that facilitates synchronization but it is a bit involved.
BTW: if you know anyone with intimate knowledge of DAQ buffer errors I could use some help. I posted a problem today as well.
I'll be in touch, jeff jberg3@unl.edu