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LED Blink Elapsed Time

Hello everyone,
I'm making a measurement of heart rate using PPG. The LED will blink synchronously with the heart beat. The problem is, i want to make the first blink of led start the elapsed time and second blink of LED stop the elapsed time (using one LED). I can only make the blink of LED stop the time elapsed, but the reading is wrong due to delay..Can anyone help me please?

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