James,
If I recall correctly, starting with LabVIEW 7.0, NI-FieldPoint 4.0, and the linked version of Measurement & Automation Explorer (3.0 I think), NI started including an FTP server with Measurement & Automation Explorer. The reason behind the inclusion was the fact that most FTP servers will not support multiple drives and NI needed a way to support it for the PXI-RT and FieldPoint-RT controllers. Personally, I have not used that FTP server, so I can not provide directions on using it.
Regards,
Aaron
LabVIEW Champion, CLA, CPI