As with CapeFl, I also have been able to duplicate your problem (LV 6.0.2 on Win95). However, once the arrays are touching, if I select one and tell it to "move to front" by highlighting it, selecting the Reorder drop-down from the toolbar and select "move to front", the problem disappears. Evidently has something to do with 2 arrays on the same level overlapping, and trying to update. Therefore, you can have your front panel the way you want it.
Mark