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Highlight execution in parallel loops

I am programming an FPGA in Labview, and am trying to debug my code. After switching my execution target to the FPGA's emulator, I activate the "highligh execution button" and press the "step into" button, but the only loop that is stepped into is the first. How can I select which loop's execution do I want to highligh? Thank you.
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Could you give more details about what is happening?
I have checked a FPGA example included in LabVIEW called UpDpwn Ctr, Synchronized.vi. This VI has two parallel while loops and when I activate the highlight execution and press step into button several times, the burbles appear in both while loops and the dataflow alternates between both loops.

crisR
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Thank you for your answer, but I already solved the problem. I had placed a "stop button" within one of the loops and wired it to that loop's and all the other loop's "stop if true". After deleting that wiring and connecting a local variable of the "stop button" to each loop's "stop if true", the vi started to work properly.
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