Hi again,
I have a suggestion for you to try. After having a look at your configuration in your screenshots, you appear to be using the same IQ Rate (1MS/s) on both the generate and recieve sides. This could be why you are seeing different signal shapes and phase relationships on the reciever side of the system. Generally, you should be oversampling by a factor of between 5 and 10 times the generation frequency on the reciever side in order to get an accurate reproduction of the signals. In your case, therefore, you could either reduce the generation IQ Rate to 1/5 or lower of its current value, OR increase the reciever side IQ rate to 5-10 times it current value. This would achieve a suitable oversampling ratio.
If you could try this, to see if it works, then that would be great.
Regards,
Dan