I am doing a very similar process. I'm using a 5411 to send a chirp to one acoustic transducer and sampling several others on the 6115. I'm using the RTSI bus on a PXI chassis. If you've got PCI, then you'd need a RTSI cable (from NI).
First I'm defining a marker on the first point of the arb signal ouput. That's done in the sequence definition. Next, I generate a trigger on the RTSI bus when the marker goes out. Lastly, I start the AI Read in trigger mode, with the RTSI channel as the source.
The attached zip file contains one vi and a jpeg to show how I'm generating the RTSI trigger from the marker, and how the AI read is configured.
~Tim