Hello Rajinikanth,
Thank you for contacting National Instruments. You should be able to achieve a sampling rate of 1000 samples/sec on each channel you are using with your hardware. I did find an example that you should be able to use as a template to start out. It is located at:
\daq\scxi\SCXI_SCANsingleBuf.prj
However, this example does use a buffer, which means that while you will be able to read at a very specific rate, there may be a delay between the time at which the value read at the SCXI module is actually processed in the computer. This means that if you are doing a control loop, it would be better to use a slower, non-timed acquisition with a simple control loop. If you have some sort of control loop, you should try to use the example:
\daq\scxi\SCXI_AIOnePt.prj
Notice, however, that with this example you will not get 1000 samples/sec.
I hope I have explained this well. If this doesn't help, you may want to contact National Instruments at www.ni.com/ask and explain the exact difficulties that prevent you from accomplishing this task.