Dave,
Asynchronous Triggering is the best way to acquire images from multiple cameras on multiple framegrabbers. The behavior you are seeing may be inherent to the large number of cameras connected, and the limitations of the pci setup. When you are missing frames every four cameras, is it every forth card, trigger connection, or is there any pattern? If you can give us more information or call in, we may be able to help more.
Thanks,
Chris
NI Applications Engineer