You are correct, neither your NI 6036E, NI 6052E, nor BNC-2110 contain a programmatic lowpass filter. In LabVIEW, the lowpass filtering VIs are available in the following location:
Functions >> Analyze >> Signal Processing >> Filters
If you are using LabVIEW 7.0, you should examine the example Filter.vi. This example uses the Filter Express VI.
Spencer S.